STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1132NADH-ubiquinone oxidoreductase subunit 3; COG3262. (182 aa)    
Predicted Functional Partners:
CL1_1131
NADH-ubiquinone oxidoreductase subunit 2; COG3261.
 
 
 
 0.956
CL1_1129
Hypothetical protein; COG1143.
 
 
   0.954
CL1_1130
NADH:ubiquinone oxidoreductase, subunit 1; COG0650.
 
 
 
 0.951
CL1_1133
NADH-ubiquinone oxidoreductase subunit 4; COG3260.
 
 
 
 0.949
CL1_0194
Putative monovalent cation/H+ antiporter 1 subunit B; COG2111.
   
   0.854
CL1_1138
Hypothetical protein; COG2111.
 
 
   0.834
CL1_1139
Hypothetical protein; COG1563.
 
 
   0.833
CL1_1140
Putative monovalent cation/H+ antiporter 2 subunit G; COG1320.
 
 
   0.830
CL1_1135
Hypothetical protein; COG0651.
 
 
   0.824
CL1_1137
Putative monovalent cation/H+ antiporter 2 subunit B; COG2111.
 
 
   0.815
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.