STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1139Hypothetical protein; COG1563. (87 aa)    
Predicted Functional Partners:
CL1_1138
Hypothetical protein; COG2111.
 
 
 
 0.955
CL1_1142
Putative monovalent cation/H+ antiporter 2 subunit E; COG1863.
 
 
 0.954
CL1_1140
Putative monovalent cation/H+ antiporter 2 subunit G; COG1320.
 
 
 0.953
CL1_1137
Putative monovalent cation/H+ antiporter 2 subunit B; COG2111.
 
 
 
 0.952
CL1_1141
Putative monovalent cation/H+ antiporter 2 subunit F; COG2212.
 
 
 
 0.947
CL1_1135
Hypothetical protein; COG0651.
 
 
 0.945
CL1_1136
Putative monovalent cation/H+ antiporter 2 subunit C; COG1006.
 
 
 0.943
CL1_1134
Hypothetical protein.
   
   0.923
CL1_1132
NADH-ubiquinone oxidoreductase subunit 3; COG3262.
 
 
   0.868
CL1_1130
NADH:ubiquinone oxidoreductase, subunit 1; COG0650.
 
 
   0.847
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.