STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1159Phosphate transport system regulator PhoU; COG1392. (224 aa)    
Predicted Functional Partners:
CL1_1158
Phosphate transporter protein; COG0306.
 
  
 0.965
CL1_1250
Putative phosphate transporter protein; COG0306.
 
  
 0.775
CL1_0050
Sodium/phosphate symporter; COG0306.
 
  
 0.762
CL1_1157
COG1409.
 
     0.668
CL1_1160
ABC type transporter permease 1; COG0842.
  
    0.646
CL1_1161
ABC type transporter ATPase 2; COG1131.
       0.626
CL1_1156
Hypothetical protein; COG1917.
       0.458
CL1_1162
Radical SAM domain protein; COG0641.
       0.445
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
 
    0.421
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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