STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1169Protein kinase-like protein; COG2112. (215 aa)    
Predicted Functional Partners:
CL1_1168
Transcription regulator, AsnC family 3; COG1522.
 
     0.788
CL1_0182
Hypothetical protein; COG1817.
  
     0.621
CL1_1126
RNA-binding protein containing THUMP domain; COG1818.
  
     0.582
CL1_1473
Hypothetical protein.
  
     0.490
CL1_1418
Hypothetical protein; COG2247.
  
   
 0.471
CL1_1095
Hypothetical protein; COG1361.
  
     0.450
CL1_0578
Hypothetical protein; COG0727.
  
     0.445
CL1_0714
Replication factor A; COG1599.
  
     0.442
CL1_0948
Hypothetical protein; COG0727.
  
     0.433
CL1_1595
Nucleotidyltransferase; COG2413.
  
   
 0.432
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.