STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1269Universal stress protein 2; COG0589. (149 aa)    
Predicted Functional Partners:
CL1_1268
Arsenical pump membrane protein; COG1055.
 
   
 0.847
CL1_1267
Hypothetical protein.
       0.801
CL1_0293
Hypothetical protein; COG0517.
 
    0.675
CL1_1266
Hypothetical protein; COG1750; Belongs to the peptidase S16 family.
       0.620
CL1_0658
Hypothetical protein; COG0517.
 
    0.574
gap
Putative glyceraldehyde-3-phosphate dehydrogenase; COG0057.
 
  
 0.528
CL1_1257
Putative methylated-DNA--protein-cysteine methyltransferase; COG0350.
  
    0.458
CL1_1740
Hypothetical protein; COG1326.
  
     0.420
pfdA-2
Prefoldin alpha subunit 2; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
  
     0.407
CL1_1187
DNA-binding protein, Tfx type; COG1356.
  
    0.406
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.