STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1276Hypothetical protein; COG0175. (423 aa)    
Predicted Functional Partners:
cysC
Putative adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.919
sat
Sulfate adenylyltransferase; COG2046; Belongs to the sulfate adenylyltransferase family.
  
  
 0.704
CL1_1513
Molybdate/tungstate ABC type transporter permease; COG0555.
  
  
 0.703
CL1_1664
Cysteine synthase; COG0031.
  
  
 0.571
CL1_1277
Hypothetical protein.
       0.539
CL1_0501
Putative nonsense-mediated mRNA decay protein, NMD3-family; COG1499.
  
     0.522
CL1_0278
Hypothetical protein; COG1031.
  
     0.471
CL1_1278
Hypothetical protein; COG3842.
       0.466
CL1_1279
Hypothetical protein; COG1721.
       0.466
CL1_0507
Glycosyl transferase family protein 6; COG1807.
  
     0.458
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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