STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1381Hypothetical protein; COG0446. (501 aa)    
Predicted Functional Partners:
CL1_1380
Hypothetical protein; COG0665.
 
 
 0.997
CL1_1369
Hypothetical protein; COG0665.
 
 
 0.925
CL1_1367
Putative ferredoxin; COG1142.
 
   
 0.849
CL1_1383
Hypothetical protein.
       0.812
CL1_1382
Sodium:solute symporter family protein; COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.809
CL1_1384
Hypothetical protein.
       0.641
CL1_1379
Galactokinase; COG0153.
     
 0.633
CL1_1366
Hypothetical protein; COG0446.
 
    
0.601
CL1_0638
Glutamate synthase beta chain-related oxidoreductase containing 2Fe-2S and 4Fe-4S clusters; COG0493.
   
 
 0.564
CL1_1377
Major facilitator superfamily permease 11; COG0477.
       0.544
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.