Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CL1_1382Sodium:solute symporter family protein; COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (538 aa)    
Predicted Functional Partners:
CL1_1383
Hypothetical protein.
       0.916
CL1_1384
Hypothetical protein.
       0.824
CL1_1380
Hypothetical protein; COG0665.
  
    0.812
CL1_1381
Hypothetical protein; COG0446.
     
 0.809
CL1_1898
Amino acid transporter; COG0531.
  
  
 0.691
CL1_1195
Sodium/hydrogen antiporter, NhaC-type; COG1757.
 
  
 0.566
CL1_0579
Hypothetical protein containing phosphoribosyltransferase-lilke domain 1; COG0503.
   
  
 0.558
CL1_0543
Sodium-dependent transporter; COG0733; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
 0.531
CL1_1379
Galactokinase; COG0153.
       0.444
CL1_1446
Dipeptide ABC transporter substrate binding protein; COG0747.
 
   
 0.423
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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