STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1390ATP:dephospho-CoA triphosphoribosyl transferase; COG1767. (308 aa)    
Predicted Functional Partners:
CL1_1388
Hypothetical protein; COG1983.
 
     0.844
CL1_1389
Hypothetical protein.
       0.818
CL1_0331
GHMP kinase 1; Catalyzes the condensation of 4-aminobenzoate (pABA) with 5- phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta- ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P).
 
     0.797
CL1_1756
Dihydropteroate synthase-like protein; COG0294.
 
   
 0.759
CL1_1387
Intracellular protease 1; COG0693.
       0.556
rnp2
Ribonuclease P protein component 2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
  
     0.477
CL1_0298
Putative adenylate cyclase 1; COG1437.
  
     0.453
CL1_1882
Putative pyrophosphohydrolase, MazG related (MazG); COG1694.
  
     0.439
CL1_1386
Transcription regulator, AsnC family 6; COG1522.
       0.420
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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