STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1396Putative glutamine amidotransferase-like protein; COG2071. (288 aa)    
Predicted Functional Partners:
CL1_1177
Hypothetical protein containing peptidase_M19 domain; COG2355.
     0.926
CL1_0909
Glutamine synthetase; COG0174; Belongs to the glutamine synthetase family.
  
  
 0.683
CL1_1397
Putative aminotransferase 4; COG1167.
  
    0.670
CL1_1398
ribose-1,5-Bisphosphate Isomerase; COG1184; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.427
CL1_1475
Glucose-1-phosphate thymidylyltransferase-like protein; COG1213; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.401
CL1_0824
Hypothetical protein containing Trimeric LpxA-like domain; COG0110.
       0.400
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.