STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1468Hypothetical protein; COG1192. (256 aa)    
Predicted Functional Partners:
ftsZ-2
Cell division protein FtsZ 3; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.921
CL1_1469
Hypothetical protein.
       0.916
CL1_0055
Chromosome partitioning protein ParB-like protein; COG1475.
  
 
 0.881
CL1_1466
Hypothetical protein; COG3609.
     
 0.826
CL1_1720
Putative Serine/threonine protein phosphatase; COG0631.
  
  
 0.785
CL1_1465
Hypothetical protein; COG1617.
       0.762
CL1_1464
Putative aspartate aminotransferase 2; COG0436.
 
  
 0.724
CL1_0049
Glycosyl transferase family 2 protein 1; COG1215.
 
 
 0.665
CL1_1463
Hypothetical protein; COG2119.
       0.648
CL1_1654
Putative glycosyl transferase protein; COG1215.
  
 
 0.619
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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