STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1515Hypothetical protein; COG1720. (147 aa)    
Predicted Functional Partners:
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
    0.662
CL1_0056
Hypothetical protein; COG0546.
       0.658
CL1_1516
Putative polysaccharide deacetylase.
       0.650
CL1_1938
Hypothetical protein; COG0491.
       0.560
CL1_1517
Putative AAA-type ATPase chaperone 3; COG0714.
       0.491
CL1_1519
Hypothetical protein; COG2610.
       0.491
CL1_1521
Hypothetical protein.
       0.471
CL1_1520
Hypothetical protein; COG1721.
       0.441
CL1_1518
Hypothetical protein.
       0.426
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.