STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1569Small heat shock protein, Hsp20 type; COG0071; Belongs to the small heat shock protein (HSP20) family. (161 aa)    
Predicted Functional Partners:
CL1_1898
Amino acid transporter; COG0531.
  
 
 0.726
CL1_1568
Cell division protein containing CDC48 domain 1; COG0464.
  
  
 0.686
CL1_1313
Replication factor C small subunit; COG1372.
   
 
 0.665
CL1_1570
Hypothetical protein; COG1236.
       0.641
CL1_0151
Putative ATP-dependent protease Lon; COG1067; Belongs to the peptidase S16 family.
  
  
 0.624
rpl10e
50S ribosomal protein L10E; COG0197; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.593
gap
Putative glyceraldehyde-3-phosphate dehydrogenase; COG0057.
 
 
 0.532
CL1_1571
methylmalonyl-CoA mutase, alpha chain; COG1884.
       0.473
CL1_1566
Hypothetical protein.
       0.467
CL1_1567
Hypothetical protein; COG2982.
       0.448
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.