STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1569Small heat shock protein, Hsp20 type; COG0071; Belongs to the small heat shock protein (HSP20) family. (161 aa)    
Predicted Functional Partners:
CL1_1568
Cell division protein containing CDC48 domain 1; COG0464.
  
 
 0.870
CL1_1570
Hypothetical protein; COG1236.
       0.838
CL1_1489
Heat shock regulator; COG1777.
     
 0.793
CL1_1145
Formate transporter; COG2116.
     
 0.785
CL1_1566
Hypothetical protein.
       0.677
CL1_0909
Glutamine synthetase; COG0174; Belongs to the glutamine synthetase family.
   
 
 0.647
rpl10e
50S ribosomal protein L10E; COG0197; Belongs to the universal ribosomal protein uL16 family.
  
 
 0.608
CL1_1313
Replication factor C small subunit; COG1372.
   
 
 0.585
CL1_0151
Putative ATP-dependent protease Lon; COG1067; Belongs to the peptidase S16 family.
  
  
 0.573
CL1_1571
methylmalonyl-CoA mutase, alpha chain; COG1884.
       0.550
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.