STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1710Ca2+/Na+ antiporter; COG0530. (310 aa)    
Predicted Functional Partners:
CL1_1708
Hypothetical protein; COG1432.
       0.733
CL1_1709
Hypothetical protein; COG1432.
       0.733
CL1_1711
Thiamine ABC transporter periplasmic binding protein; COG4143.
       0.580
CL1_1888
Sodium/hydrogen exchanger; COG0025.
 
 
 
 0.527
CL1_1413
Na+/H+ antiporter; COG0025.
 
 
 
 0.501
CL1_1898
Amino acid transporter; COG0531.
  
  
 0.467
CL1_1707
Hypothetical protein; COG0825.
       0.460
CL1_1802
Arsenical pump-driving ATPase; COG0003.
  
   0.437
CL1_0295
Putative potassium uptake protein; COG0168.
 
  
 0.422
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.