STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1715Stomatin-like protein 2; COG0330. (312 aa)    
Predicted Functional Partners:
CL1_1714
Hypothetical protein containing NfeD domain; COG1585.
  
 
 0.907
tdk
Thymidine kinase; COG1435.
     
 0.666
CL1_1716
Hypothetical protein; COG0464.
   
 0.594
CL1_1717
Hypothetical protein; COG1385.
       0.554
CL1_1496
Hypothetical protein; COG2090.
       0.552
CL1_1720
Putative Serine/threonine protein phosphatase; COG0631.
   
 
 0.518
CL1_1721
Putative Serine/threonine protein kinase; COG0515.
   
 0.499
pan
Proteasome-activating nucleotidase; ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C- termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase- [...]
   
 
 0.494
CL1_1648
Integral membrane protein rhomboid-like protein; COG0705.
  
 0.481
CL1_1718
Hypothetical protein containing PEGA domain.
       0.468
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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