STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1716Hypothetical protein; COG0464. (380 aa)    
Predicted Functional Partners:
CL1_1720
Putative Serine/threonine protein phosphatase; COG0631.
  
 
 0.917
CL1_1717
Hypothetical protein; COG1385.
       0.822
CL1_1721
Putative Serine/threonine protein kinase; COG0515.
   
 0.696
CL1_1722
Hypothetical protein containing WD40 repeat; COG2319.
  
 
 0.683
CL1_1412
Putative histone deacetylase; COG0123.
   
 0.650
CL1_1718
Hypothetical protein containing PEGA domain.
       0.642
CL1_1723
Putative Protein phosphatase 2C-like protein; COG0631.
  
 
 0.612
CL1_1715
Stomatin-like protein 2; COG0330.
   
 0.594
CL1_1719
Hypothetical protein; COG0358.
       0.592
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
  
 
 
 0.568
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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