STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1718Hypothetical protein containing PEGA domain. (615 aa)    
Predicted Functional Partners:
CL1_1721
Putative Serine/threonine protein kinase; COG0515.
 
     0.778
CL1_1719
Hypothetical protein; COG0358.
       0.709
CL1_1720
Putative Serine/threonine protein phosphatase; COG0631.
       0.699
CL1_1716
Hypothetical protein; COG0464.
       0.642
CL1_1717
Hypothetical protein; COG1385.
       0.642
CL1_1722
Hypothetical protein containing WD40 repeat; COG2319.
 
    
0.627
CL1_1724
Putiative protein kinase 1; COG0515.
     0.485
CL1_1715
Stomatin-like protein 2; COG0330.
       0.468
CL1_1714
Hypothetical protein containing NfeD domain; COG1585.
       0.413
CL1_1726
Putiative protein kinase 2; COG0515.
 
     0.401
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.