STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1723Putative Protein phosphatase 2C-like protein; COG0631. (248 aa)    
Predicted Functional Partners:
CL1_1724
Putiative protein kinase 1; COG0515.
 
 
 0.969
CL1_1726
Putiative protein kinase 2; COG0515.
 
 
 0.917
CL1_1727
Putiative protein kinase 3; COG0515.
 
 
 0.909
CL1_1721
Putative Serine/threonine protein kinase; COG0515.
 
 
 0.903
CL1_1725
Hypothetical protein; COG0464; Belongs to the AAA ATPase family.
  
 
 0.744
CL1_1722
Hypothetical protein containing WD40 repeat; COG2319.
 
 
 0.726
CL1_1412
Putative histone deacetylase; COG0123.
 
 
 0.690
CL1_1728
Hypothetical protein; COG2319.
  
 
 0.655
pcp
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.
    
   0.619
CL1_1716
Hypothetical protein; COG0464.
  
 
 0.612
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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