CL1_1728 protein (Thermococcus cleftensis) - STRING interaction network

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gene neighborhood

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textmining

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protein homology

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Score

CL1_1728

Hypothetical protein; COG2319. (691 aa)

Predicted Functional Partners:

tbp

0.856

CL1_1727

0.842

CL1_1570

0.827

CL1_1555

0.799

CL1_1726

0.795

rpl40e

0.757

CL1_1071

0.750

CL1_1412

0.675

CL1_0337

0.664

CL1_0440

0.660

Your Current Organism:

Thermococcus cleftensis

NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CL1_0337	CL1_0440	CL1_0337	CL1_0440	Putative DNA/RNA repair helicase; COG1061.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.949
CL1_0337	CL1_1071	CL1_0337	CL1_1071	Putative DNA/RNA repair helicase; COG1061.	DNA/RNA helicase, superfamily II; COG0553.	0.897
CL1_0337	CL1_1728	CL1_0337	CL1_1728	Putative DNA/RNA repair helicase; COG1061.	Hypothetical protein; COG2319.	0.664
CL1_0337	rpl40e	CL1_0337	CL1_0585	Putative DNA/RNA repair helicase; COG1061.	50S ribosomal protein L40e; COG1552; Belongs to the eukaryotic ribosomal protein eL40 family.	0.772
CL1_0337	tbp	CL1_0337	CL1_1411	Putative DNA/RNA repair helicase; COG1061.	TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.952
CL1_0440	CL1_0337	CL1_0440	CL1_0337	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Putative DNA/RNA repair helicase; COG1061.	0.949
CL1_0440	CL1_1071	CL1_0440	CL1_1071	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA/RNA helicase, superfamily II; COG0553.	0.950
CL1_0440	CL1_1570	CL1_0440	CL1_1570	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein; COG1236.	0.768
CL1_0440	CL1_1728	CL1_0440	CL1_1728	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Hypothetical protein; COG2319.	0.660
CL1_0440	rpl40e	CL1_0440	CL1_0585	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L40e; COG1552; Belongs to the eukaryotic ribosomal protein eL40 family.	0.874
CL1_0440	tbp	CL1_0440	CL1_1411	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.957
CL1_1071	CL1_0337	CL1_1071	CL1_0337	DNA/RNA helicase, superfamily II; COG0553.	Putative DNA/RNA repair helicase; COG1061.	0.897
CL1_1071	CL1_0440	CL1_1071	CL1_0440	DNA/RNA helicase, superfamily II; COG0553.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.950
CL1_1071	CL1_1412	CL1_1071	CL1_1412	DNA/RNA helicase, superfamily II; COG0553.	Putative histone deacetylase; COG0123.	0.812
CL1_1071	CL1_1728	CL1_1071	CL1_1728	DNA/RNA helicase, superfamily II; COG0553.	Hypothetical protein; COG2319.	0.750
CL1_1071	rpl40e	CL1_1071	CL1_0585	DNA/RNA helicase, superfamily II; COG0553.	50S ribosomal protein L40e; COG1552; Belongs to the eukaryotic ribosomal protein eL40 family.	0.771
CL1_1071	tbp	CL1_1071	CL1_1411	DNA/RNA helicase, superfamily II; COG0553.	TATA-box binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation.	0.557
CL1_1412	CL1_1071	CL1_1412	CL1_1071	Putative histone deacetylase; COG0123.	DNA/RNA helicase, superfamily II; COG0553.	0.812
CL1_1412	CL1_1728	CL1_1412	CL1_1728	Putative histone deacetylase; COG0123.	Hypothetical protein; COG2319.	0.675
CL1_1412	rpl40e	CL1_1412	CL1_0585	Putative histone deacetylase; COG0123.	50S ribosomal protein L40e; COG1552; Belongs to the eukaryotic ribosomal protein eL40 family.	0.617