STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1736Hypothetical protein; COG0175. (631 aa)    
Predicted Functional Partners:
cysC
Putative adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 0.993
CL1_1737
Hypothetical protein; COG2512.
       0.782
sat
Sulfate adenylyltransferase; COG2046; Belongs to the sulfate adenylyltransferase family.
  
  
 0.772
CL1_1513
Molybdate/tungstate ABC type transporter permease; COG0555.
  
  
 0.642
CL1_0880
Hypothetical protein containing SAM domain 4; COG2108.
  
     0.549
CL1_1735
Hypothetical protein; COG1373.
       0.548
CL1_1664
Cysteine synthase; COG0031.
  
  
 0.544
CL1_1740
Hypothetical protein; COG1326.
 
     0.544
trmY
Hypothetical protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
  
     0.538
CL1_0638
Glutamate synthase beta chain-related oxidoreductase containing 2Fe-2S and 4Fe-4S clusters; COG0493.
  
  
 0.538
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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