STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1783Putative dinitrogenase iron-molybdenum cofactor biosynthesis protein 1; COG1433. (155 aa)    
Predicted Functional Partners:
CL1_1784
Hypothetical protein.
       0.859
CL1_1785
Putative dinitrogenase iron-molybdenum cofactor biosynthesis protein 2; COG1433.
 
    
0.845
CL1_0289
Hypothetical protein containing metallo-hydrolase/oxidoreductase domain; COG1237.
 
     0.815
CL1_1790
Hypothetical protein; COG1149.
 
  
 0.788
CL1_1791
Hypothetical protein; COG1149.
 
  
 0.787
CL1_0477
Dinitrogenase-related iron-molybdenum cofactor protein; COG1433.
 
     0.736
CL1_0149
ABC-type transport involved in Fe -S cluster assembly, permease component; COG0719.
  
  
 0.638
CL1_0150
ABC-type transport involved in Fe -S cluster assembly, ATPase component; COG0396.
  
  
 0.638
CL1_1779
Hypothetical protein; COG1342; Belongs to the UPF0251 family.
 
    0.585
CL1_1512
Molybdate/tungstate ABC transporter periplasmic substrate-binding protein; COG0725.
 
  
 0.448
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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