STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1798Hypothetical protein containing alpha/beta hydrolase fold; COG2267. (262 aa)    
Predicted Functional Partners:
CL1_0639
NADH-quinone oxidoreductase subunit F; COG1894.
  
 
 0.907
CL1_0640
NADH-quinone oxidoreductase subunit E; COG1905.
   
   0.871
CL1_0201
NADH dehydrogenase subunit D; COG0649; Belongs to the complex I 49 kDa subunit family.
  
 
 0.850
CL1_0200
NADH dehydrogenase subunit C; COG0852.
  
 
 0.821
CL1_0199
NADH dehydrogenase subunit B; COG0377; Belongs to the complex I 20 kDa subunit family.
  
   0.788
CL1_1800
Hypothetical protein.
       0.658
CL1_1801
Hypothetical protein; COG2151.
       0.658
CL1_1802
Arsenical pump-driving ATPase; COG0003.
       0.658
CL1_1803
Hypothetical protein.
       0.658
CL1_1804
Carbon starvation protein A; COG1966.
       0.648
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.