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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1804Carbon starvation protein A; COG1966. (585 aa)    
Predicted Functional Partners:
CL1_1803
Hypothetical protein.
 
     0.882
CL1_1800
Hypothetical protein.
 
     0.877
CL1_1802
Arsenical pump-driving ATPase; COG0003.
 
     0.830
CL1_1382
Sodium:solute symporter family protein; COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
    0.747
CL1_1801
Hypothetical protein; COG2151.
       0.728
CL1_1808
Proton/glutamate symporter; COG1301.
 
  
 0.605
CL1_1805
Pyruvate carboxylase subunit B; COG5016.
       0.573
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.480
CL1_1806
Fructose 1,6-bisphosphate aldolase; COG1830.
     
 0.417
CL1_1898
Amino acid transporter; COG0531.
 
   
 0.415
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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