STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1805Pyruvate carboxylase subunit B; COG5016. (593 aa)    
Predicted Functional Partners:
CL1_0657
methylmalonyl-CoA decarboxylase subunit beta; COG1883.
 
 
 0.976
CL1_0508
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
   
 
 0.929
pckG
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
    
 0.928
CL1_1896
Pyruvate kinase; COG0469; Belongs to the pyruvate kinase family.
  
 
 0.924
CL1_1249
Pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma; COG1014.
  
 
 0.920
CL1_0008
2-oxoglutarate ferredoxin oxidoreductase subunit beta 1; COG1013.
  
 
 0.919
CL1_0011
2-oxoglutarate ferredoxin oxidoreductase subunit beta 2; COG1013.
  
 
 0.919
CL1_1243
Pyruvate ferredoxin oxidoreductase subunit beta; COG1013.
  
 
 0.918
CL1_1264
NADP-dependent malic enzyme; COG0281.
    
 0.912
CL1_0009
2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1; COG0674.
    
 0.911
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.