STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1851Cadmium-translocating P-type ATPase; COG2217. (695 aa)    
Predicted Functional Partners:
CL1_1850
Transcription regulator, ArsR family 9; COG0640.
 
  
 0.934
CL1_2038
Transcription regulator, AsnC family 5; COG1522.
     
 0.908
CL1_1898
Amino acid transporter; COG0531.
     
 0.824
CL1_0638
Glutamate synthase beta chain-related oxidoreductase containing 2Fe-2S and 4Fe-4S clusters; COG0493.
  
  
 0.707
CL1_1512
Molybdate/tungstate ABC transporter periplasmic substrate-binding protein; COG0725.
     
 0.688
CL1_0712
Metal ion-dependent transcription regulator, DtxR family; COG1321.
     
 0.684
CL1_1912
ABC type manganese/zinc transporter ATPase; COG1121.
     
 0.672
CL1_0980
Putative cation efflux system protein; COG0053.
 
 
 0.671
CL1_0149
ABC-type transport involved in Fe -S cluster assembly, permease component; COG0719.
     
 0.665
CL1_0885
Maltooligosaccharide transport system substrate-binding protein; COG2182.
      
 0.664
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.