Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CL1_1898Amino acid transporter; COG0531. (743 aa)    
Predicted Functional Partners:
CL1_1601
Asparagine synthase; COG0367.
  
 
 0.841
CL1_0937
Trk-type pottasium transport system, NAD-binding component; COG0569.
  
  
 0.828
CL1_1851
Cadmium-translocating P-type ATPase; COG2217.
     
 0.822
CL1_1897
Hypothetical protein; COG0568.
       0.774
CL1_0091
Pullulanase type II; COG0366.
  
 0.769
CL1_0884
Cyclomaltodextrinase; COG0366.
  
 0.769
CL1_1275
Cyclomaltodextrin glucanotransferase; COG0366.
  
 0.769
purD
Phosphoribosylamine-glycine ligase; COG0151; Belongs to the GARS family.
     
 0.759
gap
Putative glyceraldehyde-3-phosphate dehydrogenase; COG0057.
  
 
 0.753
CL1_0638
Glutamate synthase beta chain-related oxidoreductase containing 2Fe-2S and 4Fe-4S clusters; COG0493.
  
  
 0.744
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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