Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CL1_0230 | CL1_0237 | CL1_0230 | CL1_0237 | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | Putative tRNA-binding protein; COG2517. | 0.653 |
| CL1_0230 | CL1_0359 | CL1_0230 | CL1_0359 | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | RNA binding protein containing KH domain; COG0195. | 0.671 |
| CL1_0230 | CL1_1126 | CL1_0230 | CL1_1126 | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | RNA-binding protein containing THUMP domain; COG1818. | 0.539 |
| CL1_0230 | CL1_1942 | CL1_0230 | CL1_1942 | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | COG1409. | 0.430 |
| CL1_0230 | cpgS | CL1_0230 | CL1_1940 | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | Putative cyclic 2,3-diphosphoglycerate synthetase; Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP. | 0.499 |
| CL1_0230 | priS | CL1_0230 | CL1_0904 | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.528 |
| CL1_0237 | CL1_0230 | CL1_0237 | CL1_0230 | Putative tRNA-binding protein; COG2517. | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | 0.653 |
| CL1_0237 | cpgS | CL1_0237 | CL1_1940 | Putative tRNA-binding protein; COG2517. | Putative cyclic 2,3-diphosphoglycerate synthetase; Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP. | 0.451 |
| CL1_0237 | priS | CL1_0237 | CL1_0904 | Putative tRNA-binding protein; COG2517. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.487 |
| CL1_0359 | CL1_0230 | CL1_0359 | CL1_0230 | RNA binding protein containing KH domain; COG0195. | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | 0.671 |
| CL1_0359 | CL1_1126 | CL1_0359 | CL1_1126 | RNA binding protein containing KH domain; COG0195. | RNA-binding protein containing THUMP domain; COG1818. | 0.592 |
| CL1_0359 | CL1_1942 | CL1_0359 | CL1_1942 | RNA binding protein containing KH domain; COG0195. | COG1409. | 0.478 |
| CL1_0359 | cpgS | CL1_0359 | CL1_1940 | RNA binding protein containing KH domain; COG0195. | Putative cyclic 2,3-diphosphoglycerate synthetase; Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP. | 0.579 |
| CL1_0359 | priS | CL1_0359 | CL1_0904 | RNA binding protein containing KH domain; COG0195. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.478 |
| CL1_1126 | CL1_0230 | CL1_1126 | CL1_0230 | RNA-binding protein containing THUMP domain; COG1818. | Ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome. | 0.539 |
| CL1_1126 | CL1_0359 | CL1_1126 | CL1_0359 | RNA-binding protein containing THUMP domain; COG1818. | RNA binding protein containing KH domain; COG0195. | 0.592 |
| CL1_1126 | CL1_1942 | CL1_1126 | CL1_1942 | RNA-binding protein containing THUMP domain; COG1818. | COG1409. | 0.512 |
| CL1_1126 | cpgS | CL1_1126 | CL1_1940 | RNA-binding protein containing THUMP domain; COG1818. | Putative cyclic 2,3-diphosphoglycerate synthetase; Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP. | 0.449 |
| CL1_1126 | priS | CL1_1126 | CL1_0904 | RNA-binding protein containing THUMP domain; COG1818. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.451 |
| CL1_1708 | cpgS | CL1_1708 | CL1_1940 | Hypothetical protein; COG1432. | Putative cyclic 2,3-diphosphoglycerate synthetase; Catalyzes the formation of cyclic 2,3-diphosphoglycerate (cDPG) by formation of an intramolecular phosphoanhydride bond at the expense of ATP. | 0.437 |
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