STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1964Hypothetical protein; COG1672. (376 aa)    
Predicted Functional Partners:
CL1_0507
Glycosyl transferase family protein 6; COG1807.
  
     0.681
CL1_1815
CRISPR-associated protein Cas5; COG1688.
 
     0.675
CL1_1965
Hypothetical protein; COG1739.
       0.666
CL1_1966
Hypothetical protein containing HAD-like domain 8; COG4087.
       0.666
CL1_0376
CRISPR-associated CXXC_CXXC protein Cst1.
 
     0.625
CL1_0839
Putative oligosaccharyl transferase, STT3 subunit 1; COG1287.
  
     0.625
CL1_1908
Hypothetical protein; COG4346.
  
     0.624
CL1_0172
Glycosyl transferase family protein 5; COG5305.
  
     0.570
CL1_1904
Oligosaccharyl transferase, STT3 subunit; COG1287.
  
     0.567
CL1_0415
Phospho-sugar mutase-like protein; COG1109.
  
     0.566
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.