STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1979Hypothetical protein; COG1277. (308 aa)    
Predicted Functional Partners:
CL1_1980
Hypothetical protein; COG1470.
 
    0.943
CL1_1981
ABC type multidrug transporter ATPase 4; COG1131.
 
 
 0.919
CL1_0334
Multidrug ABC transporter ATPase 1; COG1131.
 
 
 0.633
moaC
Putative molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
     
 0.613
CL1_1676
Multidrug ABC transporter ATPase 3; COG1131.
 
 
 0.605
CL1_1478
ABC type multidrug transporter ATPase 1; COG1131.
  
 
 0.555
CL1_1161
ABC type transporter ATPase 2; COG1131.
  
 
 0.549
CL1_1215
Multidrug ABC transporter ATPase 2; COG1131.
  
 
 0.549
CL1_1457
Putative ABC type transporter, ATPase; COG1131.
  
 
 0.549
CL1_1834
ABC type multidrug transporter ATPase 2; COG1131.
  
 
 0.549
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.