STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_1998Glucose-1-dehydrogenase; COG1028. (239 aa)    
Predicted Functional Partners:
CL1_1996
Putative pyridine nucleotide-disulfide oxidoreductase; COG0492.
  
  
 0.791
CL1_1997
Hypothetical protein containing isochorismatase domain; COG1535.
  
 
 0.783
CL1_1995
Hypothetical protein; COG0820.
  
  
 0.765
CL1_0991
Hypothetical protein.
  
 
 0.689
CL1_0996
Hypothetical protein; COG3119.
  
 
 0.686
CL1_1898
Amino acid transporter; COG0531.
  
 
 0.685
CL1_1342
Hypothetical protein containing HAD-like domain 7; COG0463.
  
 
 0.681
CL1_0837
Hypothetical protein.
  
 
 0.672
CL1_1601
Asparagine synthase; COG0367.
 
 
 0.662
dys
Putative deoxyhypusine synthase; Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.
     
 0.635
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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