STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CL1_2034Hypothetical protein; COG1917. (114 aa)    
Predicted Functional Partners:
CL1_2035
Putative aspartate racemase 2; COG1794.
       0.916
CL1_2030
Putative modulator of DNA gyrase, PmbA/TldD family 1; COG0312.
 
     0.782
CL1_2031
Putative modulator of DNA gyrase, PmbA/TldD family 2; COG0312.
       0.752
CL1_1591
Hypothetical protein.
  
     0.631
CL1_2033
Hypothetical protein; COG1948.
       0.501
CL1_2032
Hypothetical protein.
       0.486
CL1_1232
Hypothetical protein containing ACT domain 2; COG2150.
  
     0.461
CL1_2036
Translation-associated GTPase; COG0012.
   
   0.459
cobB
NAD-dependent deacetylase; COG0846; Belongs to the sirtuin family. Class III subfamily.
  
    0.445
CL1_1211
Hypothetical protein; COG1549.
 
     0.433
Your Current Organism:
Thermococcus cleftensis
NCBI taxonomy Id: 163003
Other names: DSM 27260, KACC 17922, T. cleftensis, Thermococcus cleftensis Hensley et al. 2014, Thermococcus sp. CL1, strain CL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.