STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP26887.1Pfam: DctM-like transporters; TIGRFAM: dctM: TRAP transporter, DctM subunit. (436 aa)    
Predicted Functional Partners:
ANP26888.1
Hypothetical protein; Pfam: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
 
 0.980
ANP26889.1
TIGRFAM: dctP: TRAP transporter solute receptor, DctP family; Pfam: Bacterial extracellular solute-binding protein, family 7.
 
  
 0.966
ANP26891.1
Hypothetical protein; Pfam: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
 
 0.951
ANP26892.1
Pfam: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: dctP: TRAP transporter solute receptor, DctP family.
 
  
 0.919
ANP26890.1
Pfam: DctM-like transporters; TIGRFAM: dctM: TRAP transporter, DctM subunit.
 
    
0.468
ANP26893.1
Hypothetical protein; Pfam: Galactose mutarotase-like; Pfam: Glycosyl hydrolases family 31.
       0.417
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.