STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27288.1Hypothetical protein; Pfam: NUDIX domain. (178 aa)    
Predicted Functional Partners:
ANP27289.1
Pfam: Uncharacterised conserved protein (DUF2342); TIGRFAM: TIGR03624: putative hydrolase.
       0.823
ANP27659.1
Hypothetical protein; Pfam: RNB domain.
   
 0.766
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
    
 0.662
ANP27291.1
Hypothetical protein; Pfam: PDZ domain; Pfam: Lon protease (S16) C-terminal proteolytic domain; SMART: Domain present in PSD-95, Dlg, and ZO-1/2.
       0.635
ANP27278.1
Hypothetical protein; Pfam: Helicase conserved C-terminal domain; SMART: helicase superfamily c-terminal domain; SMART: DEAD-like helicases superfamily; Pfam: DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
  
 0.562
ANP27397.1
Hypothetical protein; Pfam: Helicase conserved C-terminal domain; SMART: helicase superfamily c-terminal domain; SMART: DEAD-like helicases superfamily; Pfam: DEAD/DEAH box helicase.
  
 0.562
ANP27787.1
Hypothetical protein; Pfam: DbpA RNA binding domain; SMART: DEAD-like helicases superfamily; Pfam: Helicase conserved C-terminal domain; Pfam: DEAD/DEAH box helicase; SMART: helicase superfamily c-terminal domain; Belongs to the DEAD box helicase family.
  
 0.562
ANP28180.1
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.
   
 
 0.522
ANP27292.1
HAD hydrolase, family IA; Pfam: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3; PRINTS: Haloacid dehalogenase/epoxide hydrolase family signature.
  
  
 0.515
ANP28200.1
Hypothetical protein; Pfam: Peptidase M16 inactive domain; Pfam: Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.
   
   0.446
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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