STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27363.1Hypothetical protein; Pfam: Creatinase/Prolidase N-terminal domain; Pfam: Metallopeptidase family M24. (415 aa)    
Predicted Functional Partners:
ANP27364.1
Hypothetical protein; Pfam: Creatinine amidohydrolase.
 
  
  0.964
ANP28274.1
Sarcosine oxidase, alpha subunit; Pfam: Glycine cleavage T-protein C-terminal barrel domain; PRINTS: Pyridine nucleotide disulphide reductase class-II signature; PRINTS: FAD-dependent pyridine nucleotide reductase signature; Pfam: 2Fe-2S iron-sulfur cluster binding domain; Pfam: FAD dependent oxidoreductase; Pfam: Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
 0.949
ANP28275.1
Pfam: Sarcosine oxidase, gamma subunit family.
  
  
  0.939
ANP28272.1
TIGRFAM: soxB: sarcosine oxidase, beta subunit family; Pfam: FAD dependent oxidoreductase.
 
 
 0.927
ANP28273.1
TIGRFAM: soxD: sarcosine oxidase, delta subunit family; Pfam: Sarcosine oxidase, delta subunit family.
  
  
  0.916
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.636
ANP27366.1
Hypothetical protein; Pfam: Bacterial transcriptional regulator; Pfam: IclR helix-turn-helix domain; SMART: helix_turn_helix isocitrate lyase regulation.
 
     0.520
ANP27365.1
Pfam: BCCT family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
 
   
 0.502
ANP27798.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
 
 0.474
ANP28537.1
TIGRFAM: oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter; Pfam: Oligopeptide/dipeptide transporter, C-terminal region; Pfam: Binding-protein-dependent transport system inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.466
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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