STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27395.1Pfam: Membrane transport protein. (309 aa)    
Predicted Functional Partners:
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.782
ANP28020.1
Malate dehydrogenase (oxaloacetate-darboxylating); SMART: Malic enzyme, NAD binding domain; Pfam: Malic enzyme, NAD binding domain; Pfam: Malic enzyme, N-terminal domain.
  
  
 0.755
ANP27676.1
Hypothetical protein; Pfam: NUDIX domain.
  
     0.611
ANP27394.1
Hypothetical protein; SMART: Low molecular weight phosphatase family; PRINTS: LMW phosphotyrosine protein phosphatase signature; Pfam: Low molecular weight phosphotyrosine protein phosphatase.
       0.587
ANP27397.1
Hypothetical protein; Pfam: Helicase conserved C-terminal domain; SMART: helicase superfamily c-terminal domain; SMART: DEAD-like helicases superfamily; Pfam: DEAD/DEAH box helicase.
       0.513
ANP28665.1
Hypothetical protein; Pfam: Domain of unknown function (DUF1992).
  
     0.512
ANP27027.1
Hypothetical protein; Pfam: Fructosamine kinase.
 
     0.470
ANP28408.1
Hypothetical protein.
  
     0.453
ANP27398.1
TIGRFAM: sda_mono: L-serine ammonia-lyase; Pfam: Serine dehydratase beta chain; Pfam: Serine dehydratase alpha chain; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.409
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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