STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27481.1Pfam: SelR domain; TIGRFAM: TIGR00357: methionine-R-sulfoxide reductase. (146 aa)    
Predicted Functional Partners:
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.997
ANP27482.1
Hypothetical protein; Pfam: RibD C-terminal domain.
       0.823
ANP27483.1
Malto-oligosyltrehalose trehalohydrolase; SMART: Alpha-amylase domain; Pfam: Alpha amylase, catalytic domain; Pfam: Domain of unknown function (DUF3459); Pfam: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase.
       0.774
ANP27484.1
Malto-oligosyltrehalose synthase; SMART: Alpha-amylase domain; Pfam: Alpha amylase, catalytic domain; TIGRFAM: trehalose_TreY: malto-oligosyltrehalose synthase.
       0.773
ANP27485.1
Glycogen debranching enzyme GlgX; Pfam: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glgX_debranch: glycogen debranching enzyme GlgX; SMART: Alpha-amylase domain; Pfam: Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
       0.680
ANP27480.1
Pfam: Protein of unknown function (DUF3000).
       0.670
ANP27479.1
Pfam: HRDC domain; Pfam: 3'-5' exonuclease; SMART: Helicase and RNase D C-terminal; SMART: 3'-5' exonuclease.
       0.666
ANP27284.1
NAD+ diphosphatase; Pfam: NADH pyrophosphatase-like rudimentary NUDIX domain; Pfam: NUDIX domain.
 
      0.637
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.599
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
 
 0.552
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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