STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27532.1Hypothetical protein; Pfam: Sulfite exporter TauE/SafE. (125 aa)    
Predicted Functional Partners:
ANP27533.1
Hypothetical protein; Pfam: Sulfite exporter TauE/SafE.
     0.988
ANP27777.1
Hypothetical protein; SMART: helix_turn_helix, Arsenical Resistance Operon Repressor; Pfam: Helix-turn-helix domain; PRINTS: Bacterial regulatory protein ArsR family signature.
 
     0.608
pheT
phenylalanine-tRNA ligase, beta subunit; SMART: Ferredoxin-fold anticodon binding domain; SMART: tRNA synthetase B5 domain; TIGRFAM: pheT_bact: phenylalanine--tRNA ligase, beta subunit; SMART: B3/4 domain; Pfam: B3/4 domain; Pfam: Putative tRNA binding domain; Pfam: Ferredoxin-fold anticodon binding domain; Pfam: tRNA synthetase B5 domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.587
ANP27038.1
Hypothetical protein; SMART: Domain present in PSD-95, Dlg, and ZO-1/2; Pfam: Trypsin-like peptidase domain; PRINTS: HtrA/DegQ protease family signature; Pfam: PDZ domain.
    
 
 0.419
ANP27534.1
Pfam: DNA polymerase III, delta subunit; TIGRFAM: holA: DNA polymerase III, delta subunit.
       0.416
ANP27535.1
Hypothetical protein.
       0.413
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.