STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27543.1Pfam: Protein of unknown function (DUF3097). (293 aa)    
Predicted Functional Partners:
ANP28018.1
Hypothetical protein; SMART: DEAD-like helicases superfamily; Pfam: Helicase conserved C-terminal domain; Pfam: Type III restriction enzyme, res subunit.
  
     0.762
ANP27565.1
Pfam: Protein of unknown function (DUF3145).
  
     0.728
ANP26958.1
Pfam: Protein of unknown function (DUF3151).
  
   
 0.686
hrcA
Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
       0.672
dnaJ
Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...]
       0.624
ANP27546.1
RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.622
ANP28063.1
Pfam: Protein of unknown function (DUF3499).
  
     0.582
ANP27547.1
Hypothetical protein; Pfam: Scavenger mRNA decapping enzyme C-term binding; PRINTS: Histidine triad family signature.
       0.484
ANP27761.1
Hypothetical protein.
  
     0.482
ANP28188.1
Hypothetical protein; Pfam: Helix-turn-helix domain; SMART: Helix-turn-helix XRE-family like proteins.
  
    0.482
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.