STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27813.1Hypothetical protein; Pfam: Bacterial Cytochrome Ubiquinol Oxidase. (524 aa)    
Predicted Functional Partners:
ANP27814.1
TIGRFAM: cydB: cytochrome d ubiquinol oxidase, subunit II; Pfam: Cytochrome oxidase subunit II.
 
 0.999
ANP27815.1
Pfam: ABC transporter; TIGRFAM: CydD: thiol reductant ABC exporter, CydD subunit; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter transmembrane region.
  
 0.994
ANP27816.1
Thiol reductant ABC exporter, CydC subunit; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities; TIGRFAM: CydC: thiol reductant ABC exporter, CydC subunit.
  
 0.987
ANP27817.1
Pfam: Histidine kinase; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.666
ANP27776.1
Hypothetical protein; Pfam: Cytochrome b(N-terminal)/b6/petB.
     
 0.479
atpC
Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane.
      
 0.412
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.