STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP27846.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
ANP27845.1
Hypothetical protein; Pfam: Fumarylacetoacetate (FAA) hydrolase family; Pfam: Domain of unknown function (DUF2437).
       0.652
ANP27848.1
Hypothetical protein; Pfam: Helicase conserved C-terminal domain; SMART: helicase superfamily c-terminal domain; SMART: DEAD-like helicases superfamily; Pfam: Domain of unknown function (DUF3516); Pfam: DEAD/DEAH box helicase.
 
     0.600
gltX
glutamate-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.
       0.562
ANP27538.1
Pfam: PemK-like protein.
  
     0.533
ANP27847.1
Hypothetical protein; Pfam: Endonuclease/Exonuclease/phosphatase family.
       0.480
ANP27007.1
Hypothetical protein; Pfam: CopC domain.
  
     0.438
ANP27838.1
Pfam: Hydroxymethylglutaryl-coenzyme A synthase N terminal; TIGRFAM: HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase; Pfam: Hydroxymethylglutaryl-coenzyme A synthase C terminal.
       0.432
ANP27839.1
hydroxymethylglutaryl-CoA reductase (NADPH); PRINTS: Hydroxymethylglutaryl-coenzyme A reductase signature; Pfam: Hydroxymethylglutaryl-coenzyme A reductase.
       0.432
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.432
ANP27841.1
Pfam: GHMP kinases N terminal domain; PRINTS: Mevalonate kinase family signature; TIGRFAM: Pmev_kin_Gr_pos: phosphomevalonate kinase; Pfam: GHMP kinases C terminal.
       0.432
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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