STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28110.1Hypothetical protein; PRINTS: Fatty acid synthase signature; Pfam: MaoC like domain. (144 aa)    
Predicted Functional Partners:
ANP28111.1
Hypothetical protein; Pfam: N-terminal half of MaoC dehydratase.
 
 
 0.999
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
      0.938
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
    0.651
ANP27578.1
Beta-ketoacyl-acyl-carrier-protein synthase II; Pfam: Beta-ketoacyl synthase, N-terminal domain; SMART: Beta-ketoacyl synthase; Pfam: Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.641
rpmG
Pfam: Ribosomal protein L33; TIGRFAM: rpmG_bact: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.612
ANP27581.1
Hypothetical protein; SMART: Acyl transferase domain in polyketide synthase (PKS) enzymes; Pfam: Acyl transferase domain.
  
   
 0.576
ANP27654.1
3-oxoacyl-[acyl-carrier-protein] reductase; Pfam: short chain dehydrogenase; PRINTS: Glucose/ribitol dehydrogenase family signature; PRINTS: Short-chain dehydrogenase/reductase (SDR) superfamily signature.
 
 0.551
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
    0.539
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
   
    0.538
ANP28351.1
Pfam: Catalase; Pfam: Catalase-related immune-responsive; PRINTS: Catalase signature; Belongs to the catalase family.
   
 0.538
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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