STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28171.1Hypothetical protein; Pfam: Spermine/spermidine synthase. (282 aa)    
Predicted Functional Partners:
ANP27592.1
Pfam: Protein of unknown function (DUF328); Belongs to the UPF0246 family.
  
     0.614
ANP27030.1
Hypothetical protein; Pfam: Phospholipase_D-nuclease N-terminal.
  
    0.581
ANP28170.1
Hypothetical protein.
       0.564
dinB
DNA-dirted DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.536
ANP28168.1
Pfam: Protein of unknown function (DUF3040).
 
     0.477
ANP27418.1
Hypothetical protein; Pfam: Bacterial PH domain.
  
     0.467
ANP28018.1
Hypothetical protein; SMART: DEAD-like helicases superfamily; Pfam: Helicase conserved C-terminal domain; Pfam: Type III restriction enzyme, res subunit.
  
     0.423
ANP27851.1
C4-dicarboxylate transporter/malic acid transport protein; Pfam: Voltage-dependent anion channel.
 
     0.409
ANP28042.1
YihY family inner membrane protein; Pfam: Virulence factor BrkB.
  
     0.407
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.