STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28269.1Pfam: Protein of unknown function (DUF4065). (201 aa)    
Predicted Functional Partners:
ANP28270.1
Hypothetical protein.
       0.778
ANP28468.1
Hypothetical protein; Pfam: Glycosyl transferase family 2.
  
     0.554
ANP26954.1
Hypothetical protein; Pfam: Gram positive anchor; TIGRFAM: LPXTG_anchor: LPXTG cell wall anchor domain.
  
     0.460
ANP28469.1
Hypothetical protein.
  
     0.441
ANP28271.1
Hypothetical protein.
       0.440
ANP28272.1
TIGRFAM: soxB: sarcosine oxidase, beta subunit family; Pfam: FAD dependent oxidoreductase.
       0.409
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.