STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28287.1Pfam: Cna protein B-type domain; TIGRFAM: LPXTG_anchor: LPXTG cell wall anchor domain; TIGRFAM: RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain; Pfam: Gram positive anchor. (569 aa)    
Predicted Functional Partners:
ANP28286.1
TIGRFAM: sortase_fam: sortase; Pfam: Sortase family.
 
   
 0.951
ANP28285.1
Hypothetical protein.
 
     0.864
ANP28283.1
Hypothetical protein.
     
 0.785
ANP28284.1
Pfam: Cna protein B-type domain.
       0.773
ANP28288.1
Hypothetical protein.
       0.572
ANP26926.1
Hypothetical protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter; Pfam: FtsX-like permease family; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
     0.552
ANP27713.1
Pfam: Pyruvate kinase, barrel domain; TIGRFAM: pyruv_kin: pyruvate kinase; PRINTS: Pyruvate kinase family signature; Pfam: Pyruvate kinase, alpha/beta domain; Belongs to the pyruvate kinase family.
   
    0.457
ANP27486.1
Hypothetical protein; Pfam: haloacid dehalogenase-like hydrolase.
  
     0.433
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.