STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28446.1Hypothetical protein; Pfam: Domain of unknown function (DUF4177). (58 aa)    
Predicted Functional Partners:
ANP28445.1
Hypothetical protein; Pfam: YjgF/chorismate_mutase-like, putative endoribonuclease.
  
    0.840
ANP28444.1
Hypothetical protein; SMART: Metallo-beta-lactamase superfamily; Pfam: Metallo-beta-lactamase superfamily.
       0.823
whiB-3
Hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.823
ANP27269.1
Pfam: Protein of unknown function (DUF3117).
  
     0.774
ANP28449.1
Hypothetical protein; Pfam: Calcineurin-like phosphoesterase.
 
     0.705
ANP28448.1
Hypothetical protein; Pfam: Transglycosylase; Pfam: Penicillin binding protein transpeptidase domain.
       0.656
ANP27468.1
Hypothetical protein.
  
     0.499
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
     0.417
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.