STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28473.1Hypothetical protein; Pfam: Acyltransferase family. (698 aa)    
Predicted Functional Partners:
ANP28472.1
Hypothetical protein; Pfam: Aminopeptidase I zinc metalloprotease (M18); PRINTS: Aminopeptidase I zinc metalloprotease (M18) signature.
       0.648
ANP28069.1
TIGR03089 family protein.
 
     0.495
ANP28471.1
Hypothetical protein; Pfam: Glycosyl transferase family 2.
     
 0.476
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.