STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28540.1Hypothetical protein; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate. Belongs to the DapA family. (308 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.974
nanE
N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
  
 0.963
ANP28541.1
Hypothetical protein; Pfam: ROK family.
 
 
 0.962
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
 
 0.960
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
  
 
0.928
ANP28544.1
Exo-alpha-sialidase; Pfam: NPCBM-associated, NEW3 domain of alpha-galactosidase; Pfam: BNR repeat-like domain.
 
   
 0.910
ANP28543.1
Hypothetical protein.
 
     0.881
ANP28539.1
Exo-alpha-sialidase; Pfam: BNR repeat-like domain; Pfam: Laminin G domain.
 
   
 0.829
ANP28537.1
TIGRFAM: oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter; Pfam: Oligopeptide/dipeptide transporter, C-terminal region; Pfam: Binding-protein-dependent transport system inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
   
 0.804
ANP28535.1
Hypothetical protein; Pfam: Bacterial extracellular solute-binding proteins, family 5 Middle.
 
     0.762
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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