STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28626.1Pfam: Periplasmic solute binding protein family; TIGRFAM: anch_rpt_subst: anchored repeat ABC transporter, substrate-binding protein; PRINTS: Adhesin B signature; PRINTS: Adhesin family signature; Belongs to the bacterial solute-binding protein 9 family. (525 aa)    
Predicted Functional Partners:
ANP28627.1
TIGRFAM: P_ac_wall_RPT: actinobacterial surface-anchored protein domain.
     0.993
ANP28628.1
SMART: ATPases associated with a variety of cellular activities; TIGRFAM: anch_rpt_ABC: anchored repeat-type ABC transporter, ATP-binding subunit; Pfam: ABC transporter.
 
  
 0.970
ANP28629.1
Pfam: ABC 3 transport family; TIGRFAM: anch_rpt_perm: anchored repeat-type ABC transporter, permease subunit.
 
  
 0.967
ANP28625.1
TIGRFAM: P_ac_wall_RPT: actinobacterial surface-anchored protein domain.
  
 0.929
ANP26784.1
Hypothetical protein; Pfam: ABC 3 transport family.
 
  
 0.840
ANP26783.1
Hypothetical protein; Pfam: ABC 3 transport family.
 
  
 0.828
ANP26785.1
Hypothetical protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
  
 0.826
ANP27557.1
Hypothetical protein; Pfam: ABC 3 transport family.
 
  
 0.808
ANP26696.1
Hypothetical protein; TIGRFAM: P_ac_wall_RPT: actinobacterial surface-anchored protein domain.
 
     0.772
ANP27558.1
Hypothetical protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
  
 0.691
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.