STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP28683.1parB-like partition protein; Pfam: ParB-like nuclease domain; TIGRFAM: parB_part: ParB/RepB/Spo0J family partition protein; SMART: ParB-like nuclease domain; Belongs to the ParB family. (456 aa)    
Predicted Functional Partners:
ANP28684.1
Hypothetical protein; Pfam: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 0.998
ANP27680.1
Hypothetical protein; Pfam: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 0.977
rsmG
16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.943
ANP27671.1
Hypothetical protein; Pfam: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.918
ANP28686.1
Hypothetical protein; Pfam: R3H domain; SMART: Putative single-stranded nucleic acids-binding domain.
  
  
 0.848
ANP28687.1
TIGRFAM: yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family; Pfam: 60Kd inner membrane protein.
  
    0.827
ANP28191.1
Hypothetical protein; Pfam: FtsK/SpoIIIE family; Pfam: Domain of unknown function (DUF4117); Pfam: Ftsk gamma domain.
  
  
 0.824
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
  
 0.737
ftsZ
Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.730
ANP28689.1
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
     
 0.666
Your Current Organism:
Dermabacter vaginalis
NCBI taxonomy Id: 1630135
Other names: D. vaginalis, DSM 100050, Dermabacter sp. AD1-86, Dermabacter vaginalis Chang et al. 2016, KCTC 39585, strain AD1-86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.