STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AS592_12150LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
KYJ86754.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KYJ87334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
KYJ87194.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
KYJ85729.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
KYJ86278.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.987
KYJ85546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
KYJ86600.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.971
KYJ85744.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.934
KYJ85529.1
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
KYJ85842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.905
Your Current Organism:
Sulfurovum riftiae
NCBI taxonomy Id: 1630136
Other names: DSM 101780, JCM 30810, S. riftiae, Sulfurovum riftiae Giovannelli et al. 2016, Sulfurovum sp. 1812E, strain 1812E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.